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Science Journals

Peer-reviewade publikationer — 56237 artiklar

Structure-Feature Aligned Graph Learning via Alternating Constrained Optimization
arXiv:2607.11577v1 Announce Type: new Abstract: We introduce a constrained two-view framework for node prediction that aligns structure-conditioned GNN embeddings with a structure-free feature prior learned by an anchor model. Conventional Graph Neural Networks (GNNs) couple feature transformation and neighborhood aggregation, which renders them vulnerable to topology noise and heterophilous connections. To decouple this dependency, our framework utilizes an independent anchor network to capture intrinsic attribute features via a self-supervised reconstruction objective. Furthermore, we propose a Channel-Split Adaptive Gated GNN (CSAG-GNN) that dynamically routes representations between global spectral smoothing and local spatial discrimination through a node-wise gating mechanism. We propose a stable cyclic alternating optimization strategy to solve the resulting coupled bi-level objective, preventing mutual representation drift during training. Empirical results on both homophilous and heterophilous benchmarks show balanced performance gains and structural robustness over competitive baselines.
Direct Object-Level Reconstruction via Probabilistic Gaussian Splatting
arXiv:2603.14316v2 Announce Type: replace Abstract: Object-level 3D reconstruction play important roles across domains such as cultural heritage digitization, industrial manufacturing, and virtual reality. However, existing Gaussian Splatting-based approaches generally rely on full-scene reconstruction, in which substantial redundant background information is introduced, leading to increased computational and storage overhead. To address this limitation, we propose an efficient single-object 3D reconstruction method based on 2D Gaussian Splatting. By directly integrating foreground-background probability cues into Gaussian primitives and dynamically pruning low-probability Gaussians during training, the proposed method fundamentally focuses on an object of interest and improves the memory and computational efficiency. Our pipeline leverages probability masks generated by YOLO and SAM to supervise probabilistic Gaussian attributes, replacing binary masks with continuous probability values to mitigate boundary ambiguity. Additionally, we propose a dual-stage filtering strategy for training's startup to suppress background Gaussians. And, during training, rendered probability masks are conversely employed to refine supervision and enhance boundary consistency across views. Experiments conducted on the MIP-360, T&T, and NVOS datasets demonstrate that our method exhibits strong self-correction capability in the presence of mask errors and achieves reconstruction quality comparable to standard 3DGS approaches, while requiring only approximately 1/10 of their Gaussian amount. These results validate the efficiency and robustness of our method for single-object reconstruction and highlight its potential for applications requiring both high fidelity and computational efficiency.
TouchThinker: Scaling Tactile Commonsense Reasoning to the Open World with Large-scale Data and Action-aware Representation
arXiv:2606.11637v3 Announce Type: replace Abstract: Touch is a key modality for embodied agents to understand the physical world. Although recent work has incorporated tactile signals into language systems for tactile commonsense reasoning, scaling such systems to realistic open-world settings remains challenging due to two key bottlenecks: (1) current tactile reasoning datasets remain limited in format and scale, providing insufficient supervision for reasoning from tactile observations to physical commonsense and hindering the learning of transferable tactile commonsense; (2) Tactile signals are inherently redundant and action-specific, yet existing methods often overlook these properties, resulting in inefficient representations with limited semantic expressiveness. To address these limitations, we propose TouchThinker, a tactile-language framework that scales tactile commonsense reasoning to the open world from both data and representation perspectives. First, we construct TouchThinker-1M, a million-scale, multi-source tactile reasoning dataset covering \textbf{415} objects, \textbf{8} scenarios, and \textbf{7} sensor types, providing a solid data foundation for open-world generalization. We further introduce TouchThinker-Bench, an open-world benchmark with more realistic and diverse tasks. Then, we propose action-aware modeling mechanism to improve tactile representation efficiency and enable efficient reasoning. Experimental results demonstrate that TouchThinker achieves competitive performance against state-of-the-art models across multiple datasets. Our code and dataset will be made available at: https://github.com/lvkailin0118/TouchThinker.
Can AI Reason Like an Urban Planner? Benchmarking Large Language Models Against Professional Judgment
arXiv:2606.11678v2 Announce Type: replace Abstract: Problem, Research Strategy, and Findings: The rise of large language models (LLMs) raises a key question for urban planning: which forms of professional planning knowledge can AI replicate, and which still require human judgment? Although AI tools are increasingly used in planning practice, there is still no systematic framework for testing whether they can reason with the contextual sensitivity, value awareness, and institutional literacy central to planning expertise. This paper introduces Urban Planning Bench (UPBench), a domain-specific evaluation framework that assesses LLM reasoning through a 4x5 matrix of four knowledge pillars and five cognitive levels adapted from Bloom's revised taxonomy. Evaluating 25 LLMs with automated scoring and expert review, we find a non-monotonic cognitive curve: models perform better on higher-order analytical tasks than on factual recall and integrative judgment. This suggests that planning knowledge often treated as lower-order is deeply shaped by institutional, jurisdictional, and temporal context, making it hard for LLMs to generalize. We summarize these limits as four epistemic diagnostics: regulatory hallucination, conceptual conflation, wickedness paralysis, and phronetic deficit. Takeaway for Practice: The findings support differential delegation in planning. LLMs can assist with cross-disciplinary synthesis, literature review, scenario generation, and preliminary policy analysis. However, they remain unreliable for jurisdiction-specific regulation, normative conflict resolution, and context-sensitive procedure. Agencies should require verification for AI-assisted regulatory analysis, while planning education should emphasize institutional literacy, normative judgment, and contextual sensitivity.
Demixing Sparse Signals from Nonlinear Observations using Generalized Non-convex Regularization
arXiv:2607.10618v1 Announce Type: cross Abstract: We consider the recovery of a pair of sparse vectors from a limited number of nonlinear observations of their superposition: $y_i=g(\inner{\ba_i}{\bPhi\bw^\ast+\bPsi\bz^\ast})+e_i$, $i=1,\dots,m$, with $m\ll n$, incoherent orthonormal bases $\bPhi,\bPsi$, a scalar link $g$, and noise $e_i$ that may be heavy-tailed or contaminated. We propose a regularization-based framework combining a Huberized data fidelity with generalized folded-concave penalties (SCAD, MCP), and a two-block proximal alternating algorithm with backtracking (NLD-PALM) whose whole iterate sequence provably converges to critical points under the Kurdyka--\L{}ojasiewicz property, with local linear rates. On the statistical side we establish restricted strong convexity of the Huberized nonlinear loss through an exact sign-definite decomposition, and derive estimation error bounds of order $\sigma\sqrt{s\log(n)/m}$ that hold at \emph{every} localized stationary point, an oracle rate $\sigma\sqrt{s/m}$ free of $\log n$ and shrinkage bias under a beta-min condition, and a co-equal recovery theorem for \emph{unknown} monotone links via a linear surrogate and a clipped Plan--Vershynin decoupling. The estimator requires no knowledge of the sparsity levels, and its guarantees hold under symmetric noise with only finite variance. Experiments at $n=512$ under a frozen data-driven regularization rule show an earlier phase transition than convex $\ell_1$ demixing and greedy hard-thresholding baselines, a $35\times$ accuracy advantage over squared-loss estimation under $5\%$ gross outliers, and successful demixing of spike-plus-background signals observed through a saturating amplifier.
Enhanced diffusion of colloidal tracers due to enzymatic activity
arXiv:2607.10646v1 Announce Type: cross Abstract: Enzymatic catalysis can generate nonequilibrium fluctuations, but how these couple to tracer motion at larger length scales depends on physical context. Here, we investigate colloidal tracers in two configurations: passive particles dispersed in an enzymatically active solution, and enzyme-decorated particles where catalysis occurs directly at the tracer surface. We combine differential dynamic microscopy (DDM), which probes ensemble-averaged long-time diffusion, with optical tweezer (OT) measurements of short-time force fluctuations, and compare several complementary metrics for quantifying activity-induced enhancement. For 1 $\mu$m tracers, we observe activity-induced enhancements in both configurations, with the strongest effects for enzyme-decorated particles, which exhibit enhanced diffusion and increased non-thermal force fluctuations. For 200 nm tracers, enhancements are more subtle and method-dependent: DDM detects modest increases in diffusion for bare particles, while corresponding signatures are not resolved by the OT. These results demonstrate that enzymatic activity can be transduced from molecular to microscale motion and forces, but that the apparent magnitude and detectability of enhancement depend strongly on tracer size, localization of activity, the timescales probed by the measurement, and the metric used to quantify enhancement. More broadly, understanding how enzyme activity modifies transport and fluctuations across scales is important for interpreting nonequilibrium dynamics in active soft matter, intracellular transport, and chemically crowded biological environments.
Driven Quantum Stars as Controlled Primitives for Real-Time Spin Dynamics
arXiv:2607.10899v1 Announce Type: cross Abstract: Quantum advantage in real-time spin dynamics should be assessed against the strongest relevant classical substitutes, not merely against the qubit nature of the microscopic system. We develop a physics-based diagnostic for this boundary by reducing a qubit spin model to a spin-Landau--Lifshitz (LL) classical sector and organizing the residual quantum sector as controlled corrections. The control parameter is graph coordination: we study a spin star with \(d\) leaves and \(O(1/d)\) hub--leaf couplings. In its homogeneous form the star benchmarks the transition from LL-substitutable dynamics to genuinely quantum, discrete-sector interference; in its fully driven form, with time-dependent fields and bilinear couplings, it is the basic message-passing primitive for tree and loopy spin structures. For coherent-state return amplitudes we prove exact leaf elimination and derive a continuous-time \(1/d\) hierarchy. L0 is a driven one-spin weak-mean-field theory, while G1 is a Gaussian nonlocal-in-time influence correction coupling leaf two-time kernels to the hub weak two-point function. On bounded finite-time windows away from zeros of the boundary amplitudes, the hierarchy gives \(\log\mathcal A-\log\mathcal A_{\rm L0}=O(1/d)\) and \(\log\mathcal A-\log\mathcal A_{\rm L0}-\Delta_{\rm G1}=O(1/d^2)\); numerical tests on fully driven anisotropic ensembles give slopes \(-1.05\) and \(-2.03\). Static, inhomogeneous, aligned, and fully driven stars provide validation rungs, and comparison with a temporal matrix-product influence-matrix baseline delineates complementary regimes. Unlike rank compression on a Trotter grid, the hierarchy is ordered by a physical parameter, formulated in continuous time, and each truncation level is itself a physical theory, with the LL sector as the high-coordination limit.
SUREFlow: State-space Uncertainty-aware REsidual Flow Matching for Robust Robot Manipulation
arXiv:2607.10504v1 Announce Type: new Abstract: Generative vision-language-action policies have advanced robot manipulation, but they often exhibit instability under noise, partial observability, and stochastic initial conditions. During extended rollouts, small velocity errors accumulate, degrading execution reliability. Existing diffusion and flow-based policies typically assume homoscedastic residuals and lack explicit uncertainty modeling within action generation, limiting robustness during iterative rollout. We propose SUREFlow, a state-space uncertainty-aware residual flow matching framework built on a Mamba backbone. The method jointly predicts action velocities and input-dependent residual uncertainty, enabling selective refinement of unreliable action dimensions without environment feedback while preserving computational efficiency. On LIBERO, SUREFlow achieves 92.5% average success rate (SR), outperforming the Mamba-based MaIL by 34.2%. On LIBERO-PRO, it attains around 49% SR using only 179M parameters, achieving performance comparable to large VLAs with 3-7B parameters. SUREFlow source code is available on: https://github.com/tanvirnwu/SUREFlow
NVAITC AI Scientist: A Governed End-to-End Research System -- A Hypertension GWAS Case Study
arXiv:2607.11084v1 Announce Type: new Abstract: Agentic research systems are emerging as a new paradigm for coordinating scientific workflows beyond isolated model inference, code generation, or statistical analysis. However, deployment in institutional biomedical environments requires governed mechanisms for research planning, data access, workflow orchestration, evidence tracking, reproducibility, and human oversight. We present NVAITC AI Scientist (NAIS), a governed end-to-end agentic research system designed to support domain-general scientific workflows while keeping protected data within institutional privacy boundaries. NAIS integrates proposal review, execution planning, governed computational routing, reproducible workflow orchestration, evidence generation, and scientist-in-the-loop oversight. We validate NAIS in a real-world hypertension genome-wide association study (GWAS) using hospital-linked genotype and electronic health record (EHR) data from 286,422 individuals under an aggregate-only data policy. The agent planned cohort extraction, orchestrated GWAS execution, generated quality-control summaries, and drafted publication-oriented outputs. Human-AI review identified phenotype discrepancies and enabled iterative refinement of the hypertension definition. After reconciliation, the agent-orchestrated GWAS reproduced established hypertension loci, including FGF5, ATP2B1, CNNM2, FTO, and GRB14, with the strongest signal at FGF5 reaching $-\log_{10}(p) \sim 70$. As a secondary demonstration, NAIS also supported a drug-induced liver injury prediction workflow, achieving a multimodal graph neural network AUC of 0.842. These results demonstrate that governed agentic research systems can support scalable AI-assisted biomedical discovery while producing outputs comparable to expert-led workflows.
Losing My Composure: Predicting Compositionality Over Time
arXiv:2607.11667v1 Announce Type: new Abstract: We explore the phenomenon of semantic change of German and English noun compounds, with the objective of investigating and modeling gradual changes of meanings and degrees of compositionality in the past and over time. To do so, we introduce the Compositionality Trend Prediction task, which is evaluated against a novel dataset of in-context compositionality ratings sampled across several decades of diachronic corpora for 23 German and 26 English target compounds, uniquely providing per-decade ratings and corresponding trends over time. These per-decade compositionality ratings allow us to investigate empirically untested hypotheses of generalized trends in compositionality over time, such as the idea that compounds should become less compositional (less transparent) over time. Beyond our empirical observations from the diachronic compositionality annotations, we perform experiments with semantic vector representations of varying complexity, as well as several temporal granularities for training these representations on diachronic data, resulting in about 100 models of each representation type, each covering a different 1--5 decade slice of a diachronic corpus. Contrary to the decisive tendency posited in the literature, we find only a small negative trend in compositionality over time in our target compounds. In our computational experiments, we find that using models trained on narrow time slices of diachronic data (single decades, or incrementally expanding temporal windows) align better with the per-decade compositionality ratings than those trained on an entire half-century window, the latter setting being an analog for the prevalent modeling approach of training representations on an entire half of a corpus' data. Additionally, we find static representations to be competitive with contextual representations in the Compositionality Trend Prediction task.
Articulate Intuition or Genuine Analysis? Benchmarking Epistemic Reliability in LLM-as-a-Judge Peer Reviews
arXiv:2607.10511v1 Announce Type: new Abstract: When an LLM judge calls a peer review analytical and a human committee calls another review high quality, are they tracking the same thing? We argue they are not, and that the difference matters philosophically. We operationalise Kahneman's dual-process theory into a structured rubric for peer review and release Kahneman4Review, a benchmark of 3,563 rated reviews scored along nine theoretically motivated textual dimensions, eight bias diagnostics, and a continuous reasoning-quality score. Three findings bear on trustworthiness: decision tier is not detectably aligned with the rubric's text-grounded epistemic-quality proxy; public-showcase agentic reviews receive higher raw scores than pooled human reviews, but length and venue explain most of the gap and the samples are not paper-paired; and ICLR review-text diagnostics shift at the 2022--2023 transition, temporally coincident with widespread LLM availability but without identifying its cause. A matched function-probe pilot further shows that the rubric distinguishes textual probes designed to contrast genuine fault-finding with surface fluency. We argue that a trustworthy reliability benchmark for LLM judges must separate analytical form from epistemic function, and propose concrete design choices toward that goal. An interactive demo is available at https://huggingface.co/spaces/nuojohnchen/Kahneman4Review.
CUST: Clustered Unit-level Similarity Transformer for Lightweight Image Super-Resolution
arXiv:2607.11088v1 Announce Type: new Abstract: Recently, Vision Transformer (ViT)-based models have exhibited remarkable performance in image super-resolution. However, the quadratic computational complexity of ViTs with respect to spatial resolution severely constrains their efficiency, leading to high latency and massive memory consumption. To alleviate this, various window-based attention mechanisms have been proposed; yet, they inherently compromise the long-range dependency modeling that is the primary advantage of ViTs. To overcome these limitations, we propose the Clustered Unit-level Similarity Transformer (CUST), a novel architecture that efficiently integrates global and local information. Specifically, CUST enables each patch to aggregate and attend to similar patches within a broadened regional scope outside its local window, thereby capturing extensive contextual understanding. Furthermore, it employs overlapping attention windows to capture local dependencies, while explicitly extracting high-frequency details by computing the residual difference between the original features and their downsampled-upsampled counterparts. Comprehensive experiments demonstrate that our proposed model achieves a practical balance between computational efficiency and restoration performance. It achieves a lower memory footprint and faster inference speed compared to recent global context or lightweight models under realistic constraints. Code is available at [https://github.com/jwgdmkj/CUST].
Online conformal inference with retrospective adjustment for faster adaptation to distribution shift
arXiv:2511.04275v2 Announce Type: replace-cross Abstract: Conformal prediction has emerged as a powerful framework for constructing distribution-free prediction sets with guaranteed coverage assuming only the exchangeability assumption. However, this assumption is often violated in online environments where data distributions evolve over time. Several recent approaches have been proposed to address this limitation, but, typically, they slowly adapt to distribution shifts because they update predictions only in a forward manner, that is, they generate a prediction for a newly observed data point while previously computed predictions are not updated. In this paper, we propose a novel online conformal inference method with retrospective adjustment, which is designed to achieve faster adaptation to distributional shifts. Our method leverages regression approaches with efficient leave-one-out update formulas to retroactively adjust past predictions when new data arrive, thereby aligning the entire set of predictions with the most recent data distribution. Through extensive numerical studies performed on both synthetic and real-world data sets, we show that the proposed approach achieves coverage close to the nominal level while reducing predictive interval width by up to approximately 30\% compared to existing online conformal prediction methods, demonstrating improved statistical efficiency alongside faster adaptation.
Integrated full pulse modeling for pellet injection in tokamaks: HPI2 model improvement and validation in WEST
arXiv:2605.10465v2 Announce Type: replace Abstract: Reliable modeling and control of core density is essential for reactor-relevant magnetic confinement fusion operation, motivating cryogenic pellet injection as a primary fueling actuator and the need for predictive pellet source models in integrated modeling. Here we present an upgrade of the physics-based pellet code HPI2 in which the plasmoid release spatial step is determined self-consistently from ablation physics, $dx_{var}=v_{\mathrm{pel}}\,t_{\mathrm{exit}}$ (optionally rescaled to trade accuracy for computational cost), removing an ad-hoc discretization parameter and improving numerical robustness across injection conditions. The upgraded model is first validated in stand-alone against a high-field-side pellet-fueled, ohmic, WEST discharge (#58656) by comparing synthetic and measured interferometry line-integrated density increments, obtaining a mean error of $\sim 10\%$. We then perform full-radius, time-dependent integrated modeling validation by coupling the new HPI2 within the High Fidelity Pulse Simulator (HFPS) workflow (JINTRAC/IMAS), combining JETTO with SANCO for the impurity/radiation evolution and TGLF-SAT2 for the turbulent transport. The coupled simulations reproduce the main density rise and relaxation after pellet injection and the associated electron-temperature transient, while taking into account the strong influence of tungsten radiation in WEST, supporting the consistency of HPI2 as a predictive pellet particle source in integrated modeling frameworks. Ultimately, this validation study supports the use of pellet modeling tools in integrated modeling studies for larger devices such as ITER.
ARMOR-IMC: Adaptive Resource Mapping for Operational Robustness via Secure In-Memory Computing
arXiv:2607.10938v1 Announce Type: new Abstract: The massive data-movement overhead in traditional architectures has led to the adoption of In-Memory Computing (IMC) for energy-efficient Deep Neural Network (DNN) processing. By leveraging emerging devices like Spin-Orbit Torque Magnetic Tunnel Junctions (SOT-MTJs), IMC bypasses the "memory wall" and reduces leakage power inherent in traditional CMOS. However, this shift introduces dual hardware threats: manufacturing Process Variation (PV) degrades reliability and increases vulnerability to fault injection, while power Side-Channel Attacks (SCAs) compromise security. Existing defenses address these threats in isolation. This work presents a posttraining framework that simultaneously hardens analog IMC accelerators against both threats without retraining the model. Implemented in the IMAC-Sim simulator, our approach uses the proposed Variation Impact Score (VIS) to guide the mapping of Fault Observation Windows (FOWs) and introduces the Leakage Per Inference (LPI) metric to quantify input-dependent power variability under stochastic injection and the resulting reduction in effective signal-to-noise ratio. Experiments show that PV-induced faults can degrade accuracy by over 50%, while our method restores near-baseline accuracy and mitigates the threat of correlation-based power analysis attacks.
A diode nanocavity for fast, efficient and tunable emission of highly entangled photon pairs and Fourier-transform-limited single photons
arXiv:2607.11494v1 Announce Type: cross Abstract: Deterministic sources of entangled photon pairs and indistinguishable photons are expected to play a key role in photonic quantum technologies. Semiconductor quantum dots are promising candidates due to their on-demand emission and compatibility with nanophotonic structures. However, current implementations face trade-offs between extraction efficiency, Purcell enhancement, as well as charge noise that causes blinking and degrades indistinguishability. Here we demonstrate a tunable nano-optoelectronic device based on a quantum dot embedded in a p-i-n diode circular-Bragg-grating-resonator and featuring extraction efficiencies up to 0.55(6) and Purcell-factor of $\sim$8. The device generates wavelength-tunable entangled photon pairs with suppressed blinking and raw (corrected) concurrence > 0.89 (0.91) over a range of 1.6 nm. The very same source also emits single, nearly Fourier-limited and highly indistinguishable photons with raw (corrected) $\mathcal{V}_{\text{HOM}}$ = 0.951(4) (0.988(6)). These results demonstrate a viable platform for semiconductor quantum photonics.
Cross-Subject Modeling for Widefield Calcium Imaging via Atlas-Aligned Spatiotemporal Tokenization
arXiv:2607.09754v1 Announce Type: new Abstract: Large-scale, multi-subject widefield calcium imaging provides unprecedented access to brain-wide cortical dynamics. However, the high dimensionality, complex spatiotemporal structure, and substantial task-irrelevant activity in widefield recordings have largely restricted modeling efforts to single-session analyses, limiting scalability and generalization. While multi-subject pretrained models have been explored for some neural modalities, multi-subject models for widefield calcium imaging have not yet been demonstrated; further, subject-invariant zero-shot behavior decoding remains elusive for multi-subject models across neural modalities more broadly. As a first step toward foundation modeling of widefield data, we introduce WiCAT, a multi-subject model that leverages self-supervised pretraining to both outperform single-session models and enable zero-shot behavior decoding on unseen subjects. WiCAT introduces an atlas-grounded tokenization scheme without session-specific components and learns globally shared spatiotemporal representations. Across multiple widefield datasets, the pretrained model supports lightweight downstream decoding, transfers across subjects, tasks, and datasets, and outperforms baseline models. Notably, the model also achieves robust zero-shot continuous behavior decoding and left-out brain region reconstruction on unseen subjects.
Qwen-Music Technical Report
arXiv:2607.11699v1 Announce Type: new Abstract: In this report, we introduce Qwen-Music, a powerful music generation model capable of producing highly musical and high-fidelity songs with complete vocal singing. Qwen-Music supports two core tasks: Text to Music Generation, which create entirely new songs from text descriptions, lyrics, and musical attributes, and Cover Song Generation, which reinterprets existing songs with different styles and vocal characteristics. Architecturally, Qwen-Music integrates three core components: Qwen-Music-Tokenizer, Qwen-Music-LLM, and Qwen-Music-Render. Qwen-Music-Tokenizer compresses audio into a 25 Hz single-codebook stream of Music Semantic Tokens that preserve semantic and melodic information for LLM prediction. Based on these tokens, Qwen-Music-LLM performs autoregressive music semantic modeling, with a key novelty being a melody-token-based chain-of-thought (Melody-CoT) mechanism that plans melodies before full-song generation, improving creativity, musicality, structural coherence, and reference-audio-based melody cloning. To overcome the fidelity limitations of discrete semantic tokens, Qwen-Music-Render performs generative stereo rendering, enriching acoustic details and producing high-fidelity stereo waveforms. Finally, we train Qwen-Music-LLM on more than 5 million hours of multilingual music data covering hundreds of languages. We first apply quality-aware pre-training curriculum, then use progressive post-training, comprising supervised initialization, offline DPO, and online GSPO, to further improve musicality and instruction-following ability. Across 600 Chinese and English prompts, Qwen-Music achieves state-of-the-art results in 13 of 16 objective musicality and audio-quality metrics. Professional evaluators also prefer Qwen-Music over leading proprietary systems. For cover song generation, Qwen-Music preserves reference melodies more accurately than leading proprietary systems.
Distributed Denial of Science: How Indirect Data Poisoning of AI Systems Can Industrialize Scientific Fraud
arXiv:2607.10712v1 Announce Type: new Abstract: Scientific fraud is the instrument of doubt that malicious entities can use to establish controversy in science. Historically, it required the resources of a company: deep pockets, ghostwritten articles, and corrupt academics. Today, Artificial Intelligence (AI) is increasingly automating scientific research, so we ask: Can a remote adversary weaponize the honest use of AI in science to compromise scientific integrity? We envision and empirically evaluate a new attack, indirect data poisoning, in which an adversary corrupts an open dataset and uploads the poisoned variant to a public repository. Autonomous research agents may independently retrieve and process this data, turning honest scientists into the unpaid and unwitting distributors of fraud at scale. Across five socially-salient topics, from hiring discrimination to the safety of autonomous vehicles, three widely used frontier AI systems (Claude Code with Claude Opus 4.7, Codex with GPT-5.5, Gemini CLI with Gemini 3.1 Pro), and 450 ethically contained experimental runs, we find that poisoning succeeds in 49.56% of runs, while the rate of poisoning detection is only 6.0%. The attack requires no topic-specific trigger-words, agent access, indirect prompt injection, or fabricated papers, only the open data ecosystem and misleading metadata. To mitigate the attacks, we propose and evaluate two measures: a scientist persona and a data provenance audit with five checks (referencing papers, social markers, statistical anomalies, related datasets, poisoning caution). We find that the persona still leaves 16.67% of runs with a poisoned conclusion, but provenance auditing reduces attack success rate to zero. Our results suggest that indirect data poisoning may enable scientific fraud at unprecedented scale, but these attacks can be mitigated with suitable auditing by agents during data retrieval.
Challenges in the simulation of enzymatic transition states with emerging multireference character
arXiv:2607.09769v1 Announce Type: new Abstract: Highly successful drugs, such as transition-state inhibitors, were designed by mimicking the precise geometry of enzymatic transition states, a strategy that requires quantum chemistry accurate enough to specify molecular structure at sub-\AA\ resolution. A central challenge during such a quantum chemistry simulation is that classical single-reference method can deviate substantially from the exact energy at strongly correlated transition states. We study the breakdown due to multireference character by studying a model system with a multireference transition state. In this work we present a proprietary PexMachina solver which reproduces the exact ground-state energy throughout the transition state scan, while single-reference methods struggle for certain geometries to achieve chemical accuracy.
Simple Features and Honest Calibration for Ambivalence and Hesitancy Recognition in Video
arXiv:2607.11120v1 Announce Type: new Abstract: We address ambivalence and hesitancy (A/H) recognition in the ABAW 2026 BAH Challenge: given a short interview video, predict whether the person shows signs of A/H. Our system combines affect-specialised text, audio, and visual representations with a small set of readable linguistic hesitation cues, fused by a reliability gate we call Affective Marker Fusion (AMF), and finished with a simple AP-weighted ensemble at a fixed decision threshold. We also introduce \emph{ASR-erased time}: speech recognisers delete fillers and hesitation pauses from the transcript, but the chunk timestamps keep the time those events took, and sixteen features built from these gaps form the strongest and most independent non-verbal channel we measured (AP $0.718$, correlation $0.11$--$0.36$ with all other members). Across controlled experiments we find three things: cross-modal conflict design does not reliably help on BAH; language is by far the strongest channel while affect-specialised audio is a useful second; and calibration matters more than architecture. Fitting ensemble weights and a threshold on the small validation split overfits: it scores $0.741$ macro-F1 on validation but only $0.690$ on the untouched test set. AP-weighting at a fixed threshold instead reaches $\mathbf{0.731}$ on test.
On the First Derivative Bounds for Rational B\'ezier Curves
arXiv:2607.10425v1 Announce Type: new Abstract: In this paper we investigate sharp upper bounds for the first derivative of rational B\'ezier curves. A long-standing conjecture posited that the linear bound $\|\mathbf{R}'(t)\| \le n\Omega \max\|\Delta_i\|$ holds for all degrees. We prove that the bound is indeed valid for $n \leq 6$, thus resolving the last open low-degree case. The problem is reformulated as maximizing a variance-like function over a compact box. Using a block argument we show that optima can only appear on one-dimensional faces, reducing the task to a finite family of polynomial inequalities, which are verified exactly via real quantifier elimination. A notable practical feature is that the bound can be evaluated in linear time with respect to the degree, making it attractive for real-time geometric processing. The same structural analysis illustrates the failure for $n=7$ and outlines how the true worst-case constant can be computed.
Life in a tight spot: Coupled dynamics of bacteria and soil across scales
arXiv:2607.10734v1 Announce Type: new Abstract: Soil harbors much of Earth's bacterial life. The activity of these bacteria governs plant growth, carbon and nitrogen cycling, and the response of land to a changing climate. Understanding this activity is difficult, however: soil is structurally and chemically heterogeneous and optically opaque, and its bacteria not only respond to their surroundings but continually reshape them, a two-way feedback that most idealized experiments and theories overlook. Here we review how this dynamic feedback governs the physics of bacterial motility, growth, and sensing in soil across three scales -- the single pore, the mesoscale of many pores, and the broader landscape.
FAIR GraphRAG: A Retrieval-Augmented Generation Approach for Semantic Data Analysis
arXiv:2607.11464v1 Announce Type: new Abstract: Retrieval-Augmented Generation (RAG) addresses the limitations of Large Language Models (LLMs) when providing responses to domain-specific questions. Graph-based RAG approaches, such as GraphRAG, enhance retrieval by capturing semantic relationships within knowledge graphs (KGs). While the FAIR principles (Findability, Accessibility, Interoperability, and Reusability) are becoming prevalent for scientific data management, especially in complex domains such as medicine, existing RAG approaches lack a structured FAIRification of the underlying knowledge resources. This lack limits their potential for FAIR information retrieval in these domains. To address this gap, we introduce FAIR GraphRAG, a novel framework that integrates FAIR Digital Objects (FDOs) as the fundamental units of a graph-based retrieval system. Each graph node represents an FDO that incorporates core data, metadata, persistent identifiers, and semantic links. We leverage LLMs to support schema construction and automated extraction of content and metadata from data sources. The framework was co-designed by physicians and computer scientists to ensure technical and clinical relevance. We apply FAIR GraphRAG to a biomedical dataset in gastroenterology, demonstrating its applicability to RNA-sequencing data. Beyond ensuring adherence to the FAIR principles, FAIR GraphRAG significantly improves question answering accuracy, coverage, and explainability, particularly for complex queries involving metadata and ontology links. This work shows the feasibility of combining FAIR data practices with graph-based retrieval techniques. We see potential for applying our approach to other specialized fields such as education and business.
Mode-locking instability and multiple soliton formation in GaN polariton waveguide cavities
arXiv:2607.11278v1 Announce Type: cross Abstract: We study the emergence of multi-soliton regimes in 1D ridge polariton waveguides of two different lengths. We show that by varying the position of the gain, which in out-of-equilibrium polariton systems is provided by the pumping laser and its associated excitonic reservoir, it is possible to tune the regime of soliton formation between single and multiple solitons. This soliton dynamics can be quantitatively reproduced by solving the Gross-Pitaevskii equations of the coupled exciton-photon system, which show that the soliton splitting mechanism is governed by the exciton reservoir dynamics.