arXiv:2504.09544v3 Announce Type: replace
Abstract: Recent advances in self-supervised deep learning have improved our ability to quantify cellular morphological changes in high-throughput microscopy screens, a process known as morphological profiling. However, most current methods only learn from images, despite many screens being inherently multimodal, as they involve both a chemical or genetic perturbation as well as an image-based readout. We hypothesized that incorporating chemical compound structures during self-supervised pre-training could improve learned representations of images from high-throughput microscopy screens. We introduce a representation learning framework, MICON (Molecular-Image Contrastive Learning), that models chemical compounds as treatments that induce transformations of cell phenotypes. MICON significantly outperforms classical hand-crafted features such as CellProfiler and existing deep-learning-based representation learning methods in challenging evaluation settings where models must identify reproducible effects of drugs across independent replicates and data-generating centers. We demonstrate that incorporating chemical compound information into the learning process provides small, but consistent improvements in performance and that modeling compounds specifically as treatments outperforms approaches that directly align images and compounds in a single representation space. Our findings point to a new direction for representation learning in morphological profiling, suggesting that methods should explicitly account for the multimodal nature of microscopy screening data.
Science Journals
arXiv:2605.15885v1 Announce Type: new
Abstract: The widespread of counterfeit integrated circuits (ICs) poses severe risks to the security, reliability, and trustworthiness of modern electronic systems. Federated learning (FL) offers a privacy-preserving paradigm for collaborative counterfeit detection across the semiconductor supply chain, but its vulnerability to byzantine data poisoning attacks limits practical deployment. This paper presents Federated Embedding Distribution Authentication (FedEDAuth), a lightweight, embedding level client authentication framework that detects and filters malicious participants before model aggregation. FedEDAuth leverages reference embedding distributions derived from a golden dataset and evaluates clients using outlier analysis, mean shift measurements, and micro-cluster behavior without requiring access to raw data or gradients. Integrated into standard FL pipelines, FedEDAuth consistently identifies all poisoned clients in experimental settings with 50 distributed participants under the byzantine data poisoning attack, achieving a 100% malicious client detection rate. After filtering, the federated model achieved a high counterfeit IC classification performance of 94.17% accuracy. These results not only validate FedEDAuth's effectiveness but also underscore the broader potential of secure, trustworthy FL frameworks as a critical advancement for next generation hardware security solutions, enabling robust, collaborative intelligence across the semiconductor supply chain.
arXiv:2510.10454v2 Announce Type: replace
Abstract: Large language models (LLMs) offer a generalizable approach for modeling patient trajectories, but suffer from the long and noisy nature of electronic health records (EHR) data in temporal reasoning. To address these challenges, we introduce Traj-CoA, a multi-agent system involving chain-of-agents for patient trajectory modeling. Traj-CoA employs a chain of worker agents to process EHR data in manageable chunks sequentially, distilling critical events into a shared long-term memory module, EHRMem, to reduce noise and preserve a comprehensive timeline. A final manager agent synthesizes the worker agents' summary and the extracted timeline in EHRMem to make predictions. In a zero-shot one-year lung cancer risk prediction task based on five-year EHR data, Traj-CoA outperforms baselines of four categories. Analysis reveals that Traj-CoA exhibits clinically aligned temporal reasoning, establishing it as a promisingly robust and generalizable approach for modeling complex patient trajectories. Implementation of Traj-CoA is available on https://github.com/zengsihang/Traj-CoA.
arXiv:2510.25404v3 Announce Type: replace
Abstract: Optimizing an experimental system can be extremely challenging when each experiment is expensive, time-consuming, or difficult to perform. Existing optimizers for expensive black-box problems, such as Bayesian optimization, are typically limited to numerical or categorical observations. They do not make use of broader domain knowledge, such as expert heuristics, relevant scientific papers, or similar previous experiments. Large language models (LLMs) can interpret this semantic information; however, even state-of-the-art LLMs struggle to reliably solve black-box optimization problems. We introduce SemanticOpt, a framework for semantic black-box optimization that equips LLMs with optimization capabilities by fine-tuning them on structured Bayesian optimization trajectories augmented with natural-language context. SemanticOpt jointly uses numerical and semantic evidence when proposing new experiments, while producing interpretable predictions aligned with Bayesian surrogate models. We construct a range of real-world optimization problems paired with semantic information to create a diverse benchmark for evaluating semantic black-box optimization. Across these domains, SemanticOpt outperforms both classical optimizers and existing LLM-based approaches on average when given relevant semantic information.
arXiv:2605.16197v1 Announce Type: new
Abstract: This position paper argues that safety and alignment cannot be achieved by constraining an external system: they must emerge from the co-regulatory design of the human--AI cognitive system as a whole ("AI as Part of Self"). Contemporary AI increasingly participates in attention allocation, reasoning, synthesis, and decision-making, shaping the very cognitive processes through which humans form beliefs, make decisions, and constitute their sense of self. Humans and AI occupy complementary epistemic roles under mutual constraint, forming a symbiotic cognitive unit whose co-regulation -- not the external control of either party alone -- is the proper locus of alignment. We identify the risks of unstructured delegation: deskilling, automation bias, transfer of epistemic authority, and oracle-style centralization of knowledge. Drawing on System~0 cognition theory, we further show that AI operates prior to conscious deliberation, shaping the pre-attentive infrastructures through which agency and trust are negotiated -- a level that conventional oversight cannot reach. We conclude with design principles for cognitive co-regulation addressed to ML engineers and governance bodies. The goal of this work is to guide human cognition toward resilience and epistemic agency at the foundation of human selfhood.
arXiv:2312.05975v3 Announce Type: replace
Abstract: Explainability is a vital aspect of modern AI for real-world impact and usability. The main objective of this paper is to emphasise the need to understand the predictions of Computer Vision models, specifically Convolutional Neural Network (CNN) models. Existing methods for explaining CNN predictions are largely based on Gradient-weighted Class Activation Maps (Grad-CAM) and focus solely on a single target class; this assumption about the target class selection neglects a large portion of the predictor CNN's prediction process. In this paper, we present an exhaustive methodology, called Fused Multi-class Gradient-weighted Class Activation Map (FM-G-CAM), that considers multiple top-predicted classes and provides a holistic explanation of the predictor CNN's rationale. We also provide a detailed mathematical and algorithmic description of our method. Furthermore, alongside a concise comparison of existing methods, we compare FM-G-CAM with Grad-CAM, quantitatively and qualitatively highlighting its benefits through real-world practical use cases. Finally, we present an open-source Python library with an FM-G-CAM implementation to conveniently generate saliency maps for CNN-based model predictions.
arXiv:2605.15832v1 Announce Type: new
Abstract: This work extends a framework for predicting the performance of High-Performance Computing (HPC) workloads using Machine Learning (ML). A common limitation in performance modeling is the restricted number of hardware counters that can be collected simultaneously. To address this, we propose a heuristic-based methodology to merge execution traces from multiple runs, each instrumented with a different set of hardware counters. Our approach matches computation bursts across executions by analyzing MPI structure, timing, and communication patterns. This process enables the construction of a unified dataset that includes a wider set of hardware features without relying on multiplexing. The output is a new synthetic trace with all merged counters, which can be used both for HPC performance prediction and for conventional performance analysis. The methodology has been validated on MareNostrum5 machine with a range of kernels and real applications. Results show that the merged counters maintain acceptable accuracy depending on the application, and can be directly used to train ML models on a richer feature space without prior counter selection.
arXiv:2605.16187v1 Announce Type: new
Abstract: Most deployed WAN Traffic Engineering (TE) systems use a logically centralized controller that periodically gathers traffic demands, runs a TE optimization or heuristic, and then programs the network. At scale, these solutions can be sub-optimal, and can take minutes to react to demand changes or failures. In this paper, we introduce OnlineTE, a system that reacts immediately to demand changes and failures, and delivers near-optimal solutions within seconds of a change. OnlineTE builds on the theory of optimization decomposition to devise scalable, near-optimal, distributed TE solvers for path-based MLU and Max-flow problems. In OnlineTE, each switch solves part of the optimization, and a central coordinator orchestrates the progress of the switches. As such, a switch can trigger a re-optimization as soon as it notices a demand change or failure, enabling high reactivity. OnlineTE scales to large WANs, and its compute requirements are well below the capabilities of modern WAN switches. It also enables a new opportunity, edge-based TE, which can utilize resources more efficiently than today's path-based approaches. On a testbed emulation of a 750-node WAN topology, OnlineTE can outperform the state-of-the-art by up to an order of magnitude.
arXiv:2603.01283v3 Announce Type: replace
Abstract: Deployed reinforcement learning systems lack a principled runtime reliability theory. We close this gap by introducing Bipredictability, P, a closed form information theoretic metric that quantifies how efficiently a closed loop interaction between agent and environment converts uncertainty into shared predictability. P admits a provable classical bound P equal, smaller than 0.5, derived from Shannon entropy subadditivity, and responsive agency necessarily suppresses P below this ceiling, a structural prediction we term the informational cost of agency. Across 21 trained continuous control agents, we confirm this prediction empirically at P = 0.33 plus minus 0.02. The same suppression signature reproduces in language model dialogue, convolutional vision systems, and classical mechanical baselines, indicating that P captures a substrate independent property of agentic interaction rather than an algorithm specific artifact. The Information Digital Twin, IDT, a model agnostic architecture that computes P from the external interaction stream, detects 89.3% of coupling degradations against 44.0% for reward based monitoring, with 4.4 times lower latency. P provides the missing measurement layer for runtime reliability and closed loop self regulation in deployed autonomous systems.
arXiv:2605.16184v1 Announce Type: new
Abstract: Second-order methods offer an attractive path toward more sample-efficient LLM training, but their practical use is often blocked by the systems cost of maintaining and updating large matrix-based optimizer states. We introduce \textbf{Asteria}, a runtime system designed to remove this bottleneck by separating second-order optimization logic from the critical GPU training path. Rather than keeping all preconditioner state on the accelerator, Asteria dynamically distributes optimizer state across GPU memory, CPU memory, and optional NVMe storage according to architectural constraints and runtime pressure. It further uses training hooks to prepare shadow states in advance, allowing expensive inverse-root computations to proceed asynchronously on the host while GPU computation continues. For distributed training, Asteria employs a bounded-staleness protocol that limits synchronization frequency while preserving optimizer effectiveness through topology-aware coordination.
We evaluate Asteria on both memory-constrained and distributed training settings. On a DGX Spark platform with a single GB10 GPU and 128GB unified memory, Asteria supports second-order training for a 1B-parameter language model. On multi-node GH200 systems, it lowers visible optimizer overhead, reduces recurring latency spikes, accelerates convergence in wall-clock time, and maintains the optimization advantages of SOAP and KL-Shampoo in a 7B-parameter language model. Our results suggest that second-order LLM training can be made practical not by simplifying the optimizer alone, but by rethinking how optimizer state, background computation, and distributed synchronization are managed at the runtime level.
arXiv:2403.13805v2 Announce Type: replace
Abstract: CLIP (Contrastive Language-Image Pre-training) uses contrastive learning from noise image-text pairs to excel at recognizing a wide array of candidates, yet its focus on broad associations hinders the precision in distinguishing subtle differences among fine-grained items. Conversely, Multimodal Large Language Models (MLLMs) excel at classifying fine-grained categories, thanks to their substantial knowledge from pre-training on web-level corpora. However, the performance of MLLMs declines with an increase in category numbers, primarily due to growing complexity and constraints of limited context window size. To synergize the strengths of both approaches and enhance the few-shot/zero-shot recognition abilities for datasets characterized by extensive and fine-grained vocabularies, this paper introduces RAR, a Retrieving And Ranking augmented method for MLLMs. We initially establish a multi-modal retriever based on CLIP to create and store explicit memory for different categories beyond the immediate context window. During inference, RAR retrieves the top-k similar results from the memory and uses MLLMs to rank and make the final predictions. Our proposed approach not only addresses the inherent limitations in fine-grained recognition but also preserves the model's comprehensive knowledge base, significantly boosting accuracy across a range of vision-language recognition tasks. Notably, our approach demonstrates a significant improvement in performance on 5 fine-grained visual recognition benchmarks, 11 few-shot image recognition datasets, and the 2 object detection datasets under the zero-shot recognition setting.
arXiv:2605.15880v1 Announce Type: new
Abstract: Thermal infrared imaging is robust to illumination variations and smoke interference, making it important for all-weather perception. However, the lack of natural color and fine texture limits target recognition, human visual interpretation, and the transfer of visible-light models. Existing infrared colorization methods mainly rely on single-band images, where insufficient spectral cues may lead to structural distortion and semantic confusion. Although infrared hyperspectral images provide rich spectral responses and material information, existing single-band frameworks remain limited in modeling spatial-spectral coupling and weak texture details. To address these issues, this paper presents FSCM, a spectral-information-guided GAN framework. Within FSCM, a frequency-enhanced spatial-spectral state-space generator composed of cascaded FSB units is constructed. Each FSB integrates three complementary components: state-space modeling captures global spatial-spectral dependencies; the frequency enhancement module (FEM) combines multi-level wavelet decomposition and Fourier gating to recover structural contours, directional high-frequency details, and global frequency responses; and the dual-stream hybrid gating module (DGM) integrates deformation-aware sampling with sparse attention to enhance effective local structures and suppress background interference. Additionally, an online semantic segmentation-guided loss is introduced to constrain the generated results, improving semantic consistency in complex road scenes. Experiments show that FSCM outperforms existing infrared colorization methods in visual quality and semantic fidelity.
arXiv:2603.13864v2 Announce Type: replace
Abstract: Real-world backdoor attacks often require poisoned datasets to be stored and transmitted before being used to compromise deep learning systems. However, in the era of big data, the inevitable use of lossy compression poses a fundamental challenge to invisible backdoor attacks. We find that triggers embedded in RGB images often become ineffective after the images are lossily compressed into binary bitstreams (e.g., JPEG files) for storage and transmission. As a result, the poisoned data lose its malicious effect after compression, causing backdoor injection to fail. In this paper, we highlight the necessity of explicitly accounting for the lossy compression process in backdoor attacks. This requires attackers to ensure that the transmitted binary bitstreams preserve malicious trigger information, so that effective triggers can be recovered in the decompressed data. Building on the region-of-interest (ROI) coding mechanism in image compression, we propose two poisoning strategies tailored to inevitable lossy compression. First, we introduce Universal Attack Activation, a universal method that uses sample-specific ROI masks to reactivate trigger information in binary bitstreams for learned image compression (LIC). Second, we present Compression-Adapted Attack, a new attack strategy that employs customized ROI masks to encode trigger information into binary bitstreams and is applicable to both traditional codecs and LIC. Extensive experiments demonstrate the effectiveness of both strategies.
arXiv:2406.18224v3 Announce Type: replace
Abstract: We provide the first fully polynomial-time randomized approximation scheme for the following two counting problems: 1. Given a Context Free Grammar $G$ over alphabet $\Sigma$, count the number of words of length exactly $n$ generated by $G$. 2. Given a circuit $\varphi$ in Decomposable Negation Normal Form (DNNF) over the set of Boolean variables $X$, compute the number of assignments to $X$ such that $\varphi$ evaluates to 1.
Finding polynomial time algorithms for the aforementioned problems has been a longstanding open problem. Prior work could either only obtain a quasi-polynomial runtime (SODA 1995) or a polynomial-time randomized approximation scheme for restricted fragments, such as non-deterministic finite automata (JACM 2021) or non-deterministic tree automata (STOC 2021).
arXiv:2605.15713v1 Announce Type: new
Abstract: Legged manipulators extend robotic capabilities beyond static manipulation by integrating agile locomotion with versatile arm control. However, achieving precise manipulation while maintaining coordinated locomotion remains a major challenge. This work presents a hierarchical reinforcement learning framework for dynamic pick-and-place tasks using a quadruped equipped with a 6-DOF robotic arm. The framework incorporates an explicit mass estimation module enabling adaptive whole-body control for objects with varying weights. In simulation, the system achieves an 86.05% success rate with payloads up to 2.3 kg. The approach is further validated through real-world experiments across six representative scenarios with controlled variations in object physical properties (size and mass) and task heights. Specifically, within a wide vertical workspace ranging from ground level to 1.1~m-high tabletops, the system demonstrates an average success rate of 73.3% for payloads up to 1.3 kg, with an average execution time of 4.06 s. Unlike prior works that handle lightweight objects and execute pick-and-place motions with slow, piecewise motions, the proposed framework exploits concurrent locomotion and manipulation for dynamic, continuous execution. These results demonstrate the potential of quadrupedal mobile manipulators for adaptive, whole-body pick-and-place with heavier payloads and extended workspaces.
arXiv:2509.23352v3 Announce Type: replace
Abstract: The integration of Reinforcement Learning (RL) into flow matching models for text-to-image (T2I) generation has driven substantial advances in generation quality. However, these gains often come at the cost of exhaustive exploration and inefficient sampling strategies due to slight variation in the sampling group. Building on this insight, we propose Dynamic-TreeRPO, which implements the sliding-window sampling strategy as a tree-structured search with dynamic noise intensities along depth. We perform GRPO-guided optimization and constrained Stochastic Differential Equation (SDE) sampling within this tree structure. By sharing prefix paths of the tree, our design effectively amortizes the computational overhead of trajectory search. With well-designed noise intensities for each tree layer, Dynamic-TreeRPO can enhance the variation of exploration without any extra computational cost. Furthermore, we seamlessly integrate Supervised Fine-Tuning (SFT) and RL paradigm within Dynamic-TreeRPO to construct our proposed LayerTuning-RL, reformulating the loss function of SFT as a dynamically weighted Progress Reward Model (PRM) rather than a separate pretraining method. By associating this weighted PRM with dynamic-adaptive clipping bounds, the disruption of exploration process in Dynamic-TreeRPO is avoided. Benefiting from the tree-structured sampling and the LayerTuning-RL paradigm, our model dynamically explores a diverse search space along effective directions. Compared to existing baselines, our approach demonstrates significant superiority in terms of semantic consistency, visual fidelity, and human preference alignment on established benchmarks, including HPS-v2.1, PickScore, and ImageReward. In particular, our model outperforms SoTA by $4.9\%$, $5.91\%$, and $8.66\%$ on those benchmarks, respectively, while improving the training efficiency by nearly $50\%$.
arXiv:2605.16181v1 Announce Type: new
Abstract: Training data attribution (TDA) for music generation must answer two questions that copyright analysis requires, namely which training songs influence a generated output and along which musical aspects the influence operates. Existing methods reduce influence to a single scalar, without revealing which musical aspects are dominant in that influence. We propose ARIA, a framework that decomposes attribution along musical aspects (five for symbolic music, three for audio) and pairs the decomposition with reliability diagnostics computed from the segment-level score matrix. It measures within-group similarity among the top-K attributed tracks against random reference groups drawn from the training pool, and diagnoses the score matrix through its singular value decomposition and column statistics. On a symbolic-music model where attribution ground truth is available through counterfactual retraining, the reliability diagnostics rank four attribution methods identically to that ground truth. On an audio music generation model, ARIA reveals attribution behaviors that vary substantially across TDA methods, flags score matrices whose retrieved tracks are nearly identical across queries rather than reflecting per-query attribution, and characterizes embedding-similarity retrieval baselines by the musical aspect each encoder surfaces. Together, ARIA produces per-aspect attribution evidence aligned with the musical aspects considered under the idea-expression distinction in copyright analysis.
arXiv:2308.06822v3 Announce Type: replace
Abstract: Federated Learning (FL) is a distributed learning paradigm that enables multiple clients to collaborate on building a machine learning model without sharing their private data. Although FL is considered privacy-preserved by design, recent data reconstruction attacks demonstrate that an attacker can recover clients' training data based on the parameters shared in FL. However, most existing methods fail to attack the most widely used horizontal Federated Averaging (FedAvg) scenario, where clients share model parameters after multiple local training steps. To tackle this issue, we propose an interpolation-based approximation method, which makes attacking FedAvg scenarios feasible by generating the intermediate model updates of the clients' local training processes. Then, we design a layer-wise weighted loss function to improve the data quality of reconstruction. We assign different weights to model updates in different layers concerning the neural network structure, with the weights tuned by Bayesian optimization. Finally, experimental results validate the superiority of our proposed approximate and weighted attack (AWA) method over the other state-of-the-art methods, as demonstrated by the substantial improvement in different evaluation metrics for image data reconstructions.
arXiv:2511.18719v4 Announce Type: replace
Abstract: Reinforcement learning (RL) has become a powerful tool for post-training visual generative models, with Group Relative Policy Optimization (GRPO) increasingly used to align generators with human preferences. However, existing GRPO pipelines rely on a single scalar reward per sample, treating each image or video as a holistic entity and ignoring the rich spatial and temporal structure of visual content. This coarse supervision hinders the correction of localized artifacts and the modeling of fine-grained perceptual cues. We introduce Visual Preference Policy Optimization (ViPO), a GRPO variant that lifts scalar feedback into structured, pixel-level advantages. ViPO employs a Perceptual Structuring Module that uses pretrained vision backbones to construct spatially and temporally aware advantage maps, redistributing optimization pressure toward perceptually important regions while preserving the stability of standard GRPO. Across both image and video benchmarks, ViPO consistently outperforms vanilla GRPO, improving in-domain alignment with human-preference rewards and enhancing generalization on out-of-domain evaluations. The method is architecture-agnostic, lightweight, and fully compatible with existing GRPO training pipelines, providing a more expressive and informative learning signal for visual generation.
arXiv:2603.08063v3 Announce Type: replace
Abstract: Cross-view UAV geolocalization is fundamentally a challenging large-scale image retrieval task, aiming to determine the geographic coordinates of Unmanned Aerial Vehicle (UAV) queries by matching them against an extensive geo-tagged satellite image database. Most existing methods learn separate feature representations for each view and determine the final prediction using naive heuristics to assess feature similarity, thereby neglecting to model the crucial cross-view relationships. In this paper, we propose SkyLink, a novel plug-and-play ranking framework that pioneers joint relational modeling of inter-view relationships to enhance cross-view UAV geolocalization. SkyLink leverages a Large Vision-Language Model (LVLM) to model the intricate visual-semantic relationships between UAV and satellite views, facilitating effective cross-view matching. To further refine the learning process, we introduce a relational-aware loss. It leverages soft labels to provide a more nuanced supervision signal, mitigating the harsh penalty on near-positive pairs. This approach enhances both training stability and the model's discriminative capacity. Extensive experiments conducted across multiple base retrieval architectures and benchmark datasets demonstrate that SkyLink significantly boosts the ranking effectiveness of existing models, consistently achieving superior performance in various challenging scenarios.
arXiv:2605.15879v1 Announce Type: new
Abstract: The available potential energy (APE) of a fluid can be defined locally in space, providing useful insights into both the energetics and dynamics of stratified flows ranging from three-dimensional turbulence to planetary scale circulations. Here we develop a framework for considering the multi-scale evolution of the local APE using a spatial filtering, or coarse-graining, approach. Evolution equations for the APE at scales larger, and smaller, than the filtering scale are derived -- including the cross-scale APE flux term. These results can be paired with existing frameworks for coarse-grained kinetic energy, offering the potential for examining a complete energy cycle that accounts for conversions between both spatial scales and energy reservoirs. An illustrative example of the application of this approach to a simulation of two-dimensional Kelvin-Helmholtz instability is provided.
arXiv:2512.21651v3 Announce Type: replace
Abstract: Large Language Models (LLMs) deliver strong performance across a wide range of NLP tasks, but their massive sizes hinder deployment on resource-constrained devices. To reduce their computational and memory burden, various compression techniques have been proposed, including quantization, pruning, and knowledge distillation. Among these, post-training quantization (PTQ) is widely adopted for its efficiency, as it requires no retraining and only a small dataset for calibration, enabling low-cost deployment. Recent advances for post-training quantization have demonstrated that even near 4-bit methods can maintain most of the original model performance. However, 1-bit quantization remains particularly challenging. A common strategy in 1-bit quantization is to determine binary weights by matching full-precision parameters, following a weight-driven criterion. However, this objective is not directly aligned with the quantized model's objective, which is to preserve the model's output behavior under the impact of quantization. A natural alternative is to adopt output-driven criteria that minimize discrepancies in model outputs using calibration data. Surprisingly, naive output-driven approaches often perform even worse in the 1-bit regime.
In this paper, we show that this failure arises from two fundamental issues: error accumulation across layers and, more critically, \emph{anisotropic distortion} of the representation space. Based on these insights, we propose a novel PTQ method for 1-bit LLMs that explicitly addresses these issues while maintaining computational efficiency. Extensive experiments demonstrate that our approach consistently outperforms existing 1-bit PTQ methods.
arXiv:2603.19732v2 Announce Type: replace
Abstract: Automated prompt optimization (APO) aims to improve large language model performance by refining prompt instructions. However, existing methods are largely constrained by fixed prompt templates, limited search spaces, or single-sided optimization that treats user questions as immutable inputs. In practice, question formulation and prompt design are inherently interdependent: clearer question structures facilitate focused reasoning and task understanding, while effective prompts reveal better ways to organize and restate queries. Ignoring this coupling fundamentally limits the effectiveness and adaptability of current APO approaches. We propose a unified multi-agent system (Helix) that jointly optimizes question reformulation and prompt instructions through a structured three-stage co-evolutionary framework. Helix integrates (1) planner-guided decomposition that breaks optimization into coupled question-prompt objectives, (2) dual-track co-evolution where specialized agents iteratively refine and critique each other to produce complementary improvements, and (3) strategy-driven question generation that instantiates high-quality reformulations for robust inference. Extensive experiments on 12 benchmarks against 6 strong baselines demonstrate the effectiveness of Helix, achieving up to 3.95% performance improvements across tasks with favorable optimization efficiency.
arXiv:2605.15833v1 Announce Type: new
Abstract: We study the Temporal Exploration problem, where an agent must visit all vertices of a temporal graph while traversing at most one available edge per time step. Unlike static graphs, which can be explored in linear time, temporal constraints can substantially increase exploration time even when every snapshot of the graph is connected.
To better understand the source of this complexity, we focus on a near-static setting and consider always-connected $k$-edge-deficient temporal graphs, in which each snapshot is connected and differs from a fixed underlying $n$-vertex graph by at most $k$ edges. Although such graphs are structurally close to static graphs, they can still exhibit non-trivial temporal behaviour. Prior work showed that these graphs can be explored in $O(kn \log n)$ time steps and established a lower bound of $\Omega(n \log k)$, leaving open whether linear-time exploration in $n$ is possible.
We resolve this question by showing that any always-connected $k$-edge-deficient temporal graph admits an exploration schedule of length $O(nk \log k)$. Moreover, given such a temporal graph, the corresponding exploration schedule can be computed in polynomial time. The obtained bound is linear in the number of vertices up to a factor depending only on $k$, removes the extraneous logarithmic dependence on $n$, and is nearly optimal. In particular, for constant $k$, our result yields an order-optimal $\Theta(n)$ exploration time, showing that temporal exploration in this near-static regime essentially retains the linear-time character of static graph traversal.
arXiv:2604.12750v2 Announce Type: replace-cross
Abstract: We study how exact Solvability Complexity Index (SCI) statements should be formulated for families of computational problems rather than for single problems. While the equality \(\mathrm{SCI}_G (\mathcal P)=k\) is unambiguous for an individual computational problem \(\mathcal P\), the family setting requires one to distinguish family-pointwise exactness, witness-space sharpness, and worst-case exactness. We formalize this trichotomy, prove that witness-space sharpness coincides with worst-case exactness but is, in general, strictly weaker than family-pointwise exactness, and give a canonical source-family example witnessing the strictness. We then establish two positive upgrade theorems: an abstract pullback principle and a concrete finite-query criterion guaranteeing that witness-space sharpness upgrades to family-pointwise exactness. Next, we introduce a decoder-regular finite-query transport preorder on SCI computational problems, prove that it is a preorder, derive a transport-saturation sufficient criterion extending the principal-source package, and show that the associated transport degrees need not form a lattice in full generality. We analyze the natural decoder classes \(\mathscr R_{\mathrm{cont}}\) and \(\mathscr R_{\mathrm{Bor}}\): on the full class the corresponding quotients are not upper semilattices, while on the nondegenerate subclass the preorder is upward and downward directed. Finally, we exhibit two natural positive families realizing the principal transport mechanism: exact integration on compact intervals and a fixed-window spectral decision family obtained by block-diagonal stabilization.